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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941628.1_cds_XP_016485398.1_76327
CDS Infomation

[gene=LOC107805827] [db_xref=GeneID:107805827] [protein=protein SMG9-like isoform X1] [protein_id=XP_016485398.1] [location=join(1563..1769,1862..1970,2798..2913,3119..3238,3415..3504,4425..4564,5876..6143,6277..6429)] [gbkey=CDS]
Sequence

ATGGCGGGCAGTGGTGGAAACCCTAGTTCGGGCGAGAAGTCTCATCAAGCTCCAAAAATC
CTATTAGCGAAGCCTGGACTTGTTAGCGCCGGCAAATTCAACCGCGGCGGCCCTGACGAC
CCTGATTCTAATGCTCACCGCCCACGCTTTGGTTCTCTTAATCTTCTCTCTGATACCTGG
GATTTCCACAGTGATCGTTTTCTCCCGTTTCTAACGGATAATACGGACTTTACAGTGGTG
GGTGTGATTGGTCCTCCAGGGGTTGGGAAGTCCACTATAATGAACGAAATATATGGTTTT
GATGCTACCTCCCCTGGAGTGCTTCCTCCCTTTGCTATAGAAACAGAAGAAACAAGGGCT
CTGTCGAAACATTGTACAGTTGGCATTGAACCGCGGGTTTCTGCTGAACGGATTATACTG
CTTGATACTCAGCCTGTTTTTAGCCCTTCGGTTTTGGCTGAAATGATTAGACCAGATGGC
TCATCCATCGTACCCATTATAAGCGGCGAATCTTTATCAGCTGAGCTAGCTCATGAACTG
ATGAGCATCCAGCTTGGTGTTCTGCTTGCATCCATTTGTCACATCATATTAGTGGTATCA
GAAGGAGTCCATGATGCTAGCATGTGGCGACTCATGTCAACGGTTGATTTGCTAAAACAT
GGCATACCTGATCCATCATCTTTAACCCTTTCCCATCCTCAAAGCTCTGAGAAAGAAAGC
AGAGAGAAAATTCTGGACAGTGGAGAAGAGTACATGGCTGATCCAGTTTTTGTGCATACA
AAACTACCCACTGAAGATCTAACACCATGTAACGTTGTTCAATTGAAGAAGGCACTCACA
CAAATCTTTTGCTCTTTATCTATTCTGAGATCAAAAAACCACACAACTGCCAAAGAGAGT
CATGTTTCTGCTGTTCCTCTCAACTCACATAGTGCTGATCGAGAATCTGAATATTTGAAA
TTATTTCTACTGCCATCTAGAAATAAAGATGAATCCTTGAAGCCACAGTATGAAAGCCAC
ATTTCAGCATTATGGAATTTGCGGGATCAGGTTTTGTCAATGAGAGGTCCATCTTTCTCA
AGGACTGTGTCCGAGCGTGATTGGCTGAAAAATTCTGCCAAGATATGGGAAATTGTTAAG
AATTCTCCCATTATGATGGACTACTGTAGAACTCTTCAAAGTTCAGGCATGGTTAGGAGG
TAA

Peptide Sequence

PEP ID

XP_016485398.1
PEP Infomation

PREDICTED: protein SMG9-like isoform X1 [Nicotiana tabacum]
Sequence

MAGSGGNPSSGEKSHQAPKILLAKPGLVSAGKFNRGGPDDPDSNAHRPRFGSLNLLSDTW
DFHSDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNEIYGFDATSPGVLPPFAIETEETRA
LSKHCTVGIEPRVSAERIILLDTQPVFSPSVLAEMIRPDGSSIVPIISGESLSAELAHEL
MSIQLGVLLASICHIILVVSEGVHDASMWRLMSTVDLLKHGIPDPSSLTLSHPQSSEKES
REKILDSGEEYMADPVFVHTKLPTEDLTPCNVVQLKKALTQIFCSLSILRSKNHTTAKES
HVSAVPLNSHSADRESEYLKLFLLPSRNKDESLKPQYESHISALWNLRDQVLSMRGPSFS
RTVSERDWLKNSAKIWEIVKNSPIMMDYCRTLQSSGMVRR

Transcript Sequence

Gene sequence data has not been registered.